Patrick,
I am running the MOPAR long tube headers. Did not coat them, but if I had to do it all over again, I would coat them. Bought the headers and had them installed thru my dealer. The headers come with limited heat wrap for specific areas which the dealer dutifully installed. Problem was, when you opened the hood, it looked like sh....t with parts of the headers wrapped and other parts bare metal. Since I was not about to pull the header off and send them out to be coated, I went ahead and wrapped the headers entirely with DEI Header wrap and stain steel ties. As for heat, headers generated a LOT more heat under the hood than stock manifolds. Even with the headers fully wrapped, there is still quite a bit more heat under the hood. But the additional heat has caused no problems.
Bottom line: I would ceramic coat them more for appearance and longevity if I was to do it all over again!